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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916070.1_cds_XP_016465751.1_58676
CDS Infomation

[gene=LOC107788586] [db_xref=GeneID:107788586] [protein=pectate lyase-like] [protein_id=XP_016465751.1] [location=join(78129..78331,78814..79480,79610..79852,80154..80378)] [gbkey=CDS]
Sequence

ATGGCCTCATTTAGTTGTAATTCAGTTATTTTTCTCTTTTCCCTTTTATGTATTGCTTCT
TTAATCCCAAACTTGCATGCCAATATTGCTGAATTTGACCCTTATTTGGAAAAGAAAGCT
GAAGAAGCCCTCAAGTCTTCTCTTGCTGCTTACAATGAAAATCCTGAGGAACTCACTGAT
ACTTTCAACAAAGAAGTTGGAGAAACAATTTTTAATGGCACAAGGAGGCATCTGAAGGAA
GAAGATAAAGATGATAAGGATGACAATGATGGTTGCAAGGCATACAATCCAATTGACAAA
TGTTGGAGGTGTGACAAAAACTGGGCTAATAACAGGAAGGCATTAGCAGATTGTGCTAGG
GGATTTGGCCATGGCACAACTGGTGGTAAAGACGGTAAATTCTACGTTGTCACCGATCCC
TCGGATGATAACGTGGAAGAGCCAAATCCAGGAACCCTTCGCCACGCTGTCATCCAAGAA
GAGCCGTTATGGATTATCTTCGAGAAGTCGATGATAATCAGGTTGAAACAAGAACTAATG
ATCAACAATGATAAGACAATTGATGGCAGGGGAGTTTCTGTTCATGTTGCATATGGAGCA
GGACTAACCATACAATTTGTGCACAATGTGATTGTCCACAACATTAGAGTTCATCACATT
CTTTCTACCTCAGGTGGTATGATCAGAGATTCTATTGATCATATTGGTCTTAGGACAGTG
AGTGATGGTGATGCTATTTCCATCTTCGGTGCCAACCGTATCTGGATCGATCATTGTACT
TTAACTAAGGGTGCTGATGGCCTCATTGATGCAATCATGGCTTCCACTGCTATCACCATT
TCTAACTGCAAATTCAATCATCATAACGACGTGATGCTTTTGGGAGCAAATGATGCCTTT
CCTCAAGATAAAATCATGCAAGTTACAGTTGCATTCAATCGGTTCGGAAAGGGATGTATT
CAGAGGATGCCAAGGTGCAGATGGGGATTCTTCCATGTTGTCAACAATGACTATGCTAAA
TGGGAAATGTATGCAATTGGTGGCACTGCTAATCCCACCATTATTAGCCAGGGTAACCGC
TTCAAGGCTTCCAACAATCCAAACACTAAAGAGGTGACAAACCGGAATGGCGCCCCAGAA
TCTCTGTGGAGAAACTGGCAATGGAGATCTGAGGGGGATTTGTTCTTGAACGGAGCCTAC
TTTAGAGAGTCTGGACCAGATATCAAGCATACTCCATTCACAGAACACACCAGCATCAAG
TTTGAGCCTGCTAAATTTGTTGGCAGACTCACTCGCAAAGCTGGTGTAATCAAGTGCAAG
ATTGGAAAAGCATGCTAG

Peptide Sequence

PEP ID

XP_016465751.1
PEP Infomation

PREDICTED: pectate lyase-like [Nicotiana tabacum]
Sequence

MASFSCNSVIFLFSLLCIASLIPNLHANIAEFDPYLEKKAEEALKSSLAAYNENPEELTD
TFNKEVGETIFNGTRRHLKEEDKDDKDDNDGCKAYNPIDKCWRCDKNWANNRKALADCAR
GFGHGTTGGKDGKFYVVTDPSDDNVEEPNPGTLRHAVIQEEPLWIIFEKSMIIRLKQELM
INNDKTIDGRGVSVHVAYGAGLTIQFVHNVIVHNIRVHHILSTSGGMIRDSIDHIGLRTV
SDGDAISIFGANRIWIDHCTLTKGADGLIDAIMASTAITISNCKFNHHNDVMLLGANDAF
PQDKIMQVTVAFNRFGKGCIQRMPRCRWGFFHVVNNDYAKWEMYAIGGTANPTIISQGNR
FKASNNPNTKEVTNRNGAPESLWRNWQWRSEGDLFLNGAYFRESGPDIKHTPFTEHTSIK
FEPAKFVGRLTRKAGVIKCKIGKAC

Transcript Sequence

Gene sequence data has not been registered.